STRINGSTRING
pcnB protein (Pasteurella multocida) - STRING interaction network
"pcnB" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcnBannotation not available (501 aa)    
Predicted Functional Partners:
dksA
dksA- RNA polymerase-binding protein DksA (145 aa)
          0.930
folK
Uncharacterized protein; folK- 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase (165 aa)
   
   
  0.911
pnp
Polynucleotide phosphorylase/polyadenylase; Polynuc_phos- polyribonucleotide nucleotidyltransferase (714 aa)
     
 
  0.764
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (96 aa)
       
 
  0.762
rnr
RNase_R- ribonuclease R (800 aa)
 
 
  0.695
DR93_982
RNaseEG- ribonuclease, Rne/Rng family domain protein (1006 aa)
   
 
  0.621
polA
Pola- DNA polymerase I (930 aa)
   
   
  0.612
DR93_1116
RNaseEG- ribonuclease, Rne/Rng family domain protein (491 aa)
   
 
  0.586
metG
Methionyl-tRNA synthetase; metG- methionine--tRNA ligase (682 aa)
 
   
  0.572
rnc
RNaseIII- ribonuclease III (225 aa)
   
 
  0.543
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (23%) [HD]