STRINGSTRING
selA protein (Pasteurella multocida) - STRING interaction network
"selA" - Selenocysteine synthase in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selASelenocysteine synthase; selA- L-seryl-tRNA selenium transferase (460 aa)    
Predicted Functional Partners:
selD
Selenophosphate synthetase; selD- selenide, water dikinase (343 aa)
 
   
  0.987
serS
Seryl-tRNA synthetase; serS- serine--tRNA ligase (428 aa)
     
 
  0.944
selB
selB- selenocysteine-specific translation elongation factor (624 aa)
 
   
  0.920
DR93_1182
FdxG; formate-DH-alph- formate dehydrogenase, alpha subunit (809 aa)
 
     
  0.901
DR93_1183
annotation not available (195 aa)
 
     
  0.754
fdhE
fdhE- formate dehydrogenase accessory protein FdhE (309 aa)
 
   
  0.735
fdxH
FdxH; FDH-beta- formate dehydrogenase, beta subunit (302 aa)
 
     
  0.729
DR93_1180
FdxI; formate-DH-gamm- formate dehydrogenase, gamma subunit (228 aa)
 
          0.634
DR93_1765
Bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; birA_ligase- biotin--[acetyl-CoA-carboxylase] ligase (312 aa)
           
  0.453
cysS
Cysteinyl-tRNA synthetase; cysS- cysteine--tRNA ligase (459 aa)
           
  0.420
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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