STRINGSTRING
lpdA protein (Pasteurella multocida) - STRING interaction network
"lpdA" - Uncharacterized protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpdAUncharacterized protein; lipoamide_DH- dihydrolipoyl dehydrogenase (472 aa)    
Predicted Functional Partners:
aceF
Pyruvate dehydrogenase dihydrolipoyltransacetylase; PDHac_trf_long- dihydrolipoyllysine-residue acetyltransferase (632 aa)
  0.998
sucB
Uncharacterized protein; sucB- dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex (404 aa)
  0.995
aceE
aceE- pyruvate dehydrogenase (acetyl-transferring), homodimeric type (887 aa)
 
  0.988
sucA
2oxo_dh_E1- oxoglutarate dehydrogenase (succinyl-transferring), E1 component (931 aa)
 
  0.966
glyA
annotation not available (420 aa)
 
 
  0.951
gdhA
annotation not available (449 aa)
   
  0.846
DR93_1368
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; D1pyr5carbox3- delta-1-pyrroline-5-carboxylate dehydrogenase (1198 aa)
       
  0.842
glnA
glnA- glutamine synthetase, type I (472 aa)
         
  0.833
pflB
PflB; Pyr_form_ly_1- formate acetyltransferase (774 aa)
         
  0.826
DR93_598
annotation not available (238 aa)
   
 
  0.667
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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