STRINGSTRING
orn protein (Pasteurella multocida) - STRING interaction network
"orn" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ornannotation not available (184 aa)    
Predicted Functional Partners:
rsgA
annotation not available (350 aa)
   
        0.732
ssb
annotation not available (166 aa)
   
      0.653
rnc
RNaseIII- ribonuclease III (225 aa)
   
   
  0.609
dnaQ
dnaQ_proteo- DNA polymerase III, epsilon subunit (253 aa)
   
 
  0.567
DR93_982
RNaseEG- ribonuclease, Rne/Rng family domain protein (1006 aa)
   
     
  0.562
rppH
annotation not available (198 aa)
   
   
  0.531
cysQ
CysQ; bisphos_cysQ- 3’(2’),5’-bisphosphate nucleotidase (275 aa)
     
   
  0.492
DR93_1297
Uncharacterized protein; Glutathione S-transferase, N-terminal domain protein (212 aa)
   
        0.461
hrpA
DEAH_box_HrpA- ATP-dependent helicase HrpA (1303 aa)
   
        0.452
rho
Rho- transcription termination factor Rho (420 aa)
           
  0.448
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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