STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sucBUncharacterized protein; sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex (404 aa)    
Predicted Functional Partners:
sucC
annotation not available
 
 0.999
sucA
2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component
 0.999
sucD
Uncharacterized protein; sucCoAalpha: succinate-CoA ligase, alpha subunit
 
 0.998
lpdA
Uncharacterized protein; lipoamide_DH: dihydrolipoyl dehydrogenase
 0.995
frdA
fum_red_Fp: fumarate reductase, flavoprotein subunit
  
 
 0.780
frdB
annotation not available
  
 
 0.778
gltA
GltA; cit_synth_I: citrate (Si)-synthase
 
 
 0.761
gor
Gluta_reduc_1: glutathione-disulfide reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
 
 0.690
aceE
aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type
 
 
 0.670
mdh
MDH_euk_gproteo: malate dehydrogenase, NAD-dependent
  
 
 0.664
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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