STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1792annotation not available (210 aa)    
Predicted Functional Partners:
DR93_1791
Carboxy-terminal protease; Prc: C-terminal processing peptidase family protein
 
 
 0.948
DR93_850
Lipoprotein NlpI
  
  
 0.829
DR93_535
Met repressor; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
  
   
 0.755
mutH
mutH_TIGR: DNA mismatch repair endonuclease MutH
  
     0.745
DR93_1533
UPF0208 membrane protein AAUPMC_07492
  
     0.744
rraB
annotation not available
  
     0.741
seqA
annotation not available
  
    0.729
yejM
annotation not available
  
     0.655
fadR
fadR_gamma: fatty acid metabolism transcriptional regulator FadR
  
     0.628
DR93_832
annotation not available
 
    0.622
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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