STRINGSTRING
rarA protein (Pasteurella multocida) - STRING interaction network
"rarA" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rarAannotation not available (445 aa)    
Predicted Functional Partners:
lolA
lolA- outer membrane lipocarrier protein LolA (205 aa)
 
        0.969
DR93_1805
annotation not available (930 aa)
   
      0.880
lrp
annotation not available (159 aa)
              0.860
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (200 aa)
   
   
  0.720
metB
annotation not available (369 aa)
   
   
  0.678
potC
annotation not available (255 aa)
     
        0.601
serS
Seryl-tRNA synthetase; serS- serine--tRNA ligase (428 aa)
   
        0.577
DR93_1703
Rec2; comEC_Rec2- DNA internalization-related competence protein ComEC/Rec2 (735 aa)
 
   
  0.555
DR93_1807
Uncharacterized protein (111 aa)
              0.546
metC
cysta_beta_ly_B- cystathionine beta-lyase (398 aa)
   
   
  0.476
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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