STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1805annotation not available (930 aa)    
Predicted Functional Partners:
lolA
lolA: outer membrane lipocarrier protein LolA
 
 
 0.972
lrp
annotation not available
    
 0.969
rarA
annotation not available
  
   0.880
polA
Pola: DNA polymerase I
 
 
 0.839
xerC
recomb_XerC: tyrosine recombinase XerC
  
 
 0.717
DR93_1703
Rec2; comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2
 
   
 0.705
xerD
recomb_XerD: tyrosine recombinase XerD; Belongs to the 'phage' integrase family
 
 
 
 0.702
DR93_1921
annotation not available
   
 
 0.661
dnaA
dnaA: chromosomal replication initiator protein DnaA
  
 
 0.650
recA
tigrfam_recA: protein RecA
 
 
 
 0.646
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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