STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1805
annotation not available (930 aa)
Predicted Functional Partners:
lolA
lolA: outer membrane lipocarrier protein LolA
0.972
lrp
annotation not available
0.969
rarA
annotation not available
0.880
polA
Pola: DNA polymerase I
0.839
xerC
recomb_XerC: tyrosine recombinase XerC
0.717
DR93_1703
Rec2; comEC_Rec2: DNA internalization-related competence protein ComEC/Rec2
0.705
xerD
recomb_XerD: tyrosine recombinase XerD; Belongs to the 'phage' integrase family
0.702
DR93_1921
annotation not available
0.661
dnaA
dnaA: chromosomal replication initiator protein DnaA