STRINGSTRING
lrp protein (Pasteurella multocida) - STRING interaction network
"lrp" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrpannotation not available (159 aa)    
Predicted Functional Partners:
lolA
lolA- outer membrane lipocarrier protein LolA (205 aa)
   
      0.970
DR93_1805
annotation not available (930 aa)
       
  0.969
rarA
annotation not available (445 aa)
              0.860
DR93_1368
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; D1pyr5carbox3- delta-1-pyrroline-5-carboxylate dehydrogenase (1198 aa)
 
     
  0.690
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2’-deoxycytidine for UMP synthesis (297 aa)
     
   
  0.585
oxyR
annotation not available (298 aa)
           
  0.561
seqA
annotation not available (206 aa)
           
  0.553
DR93_1807
Uncharacterized protein (111 aa)
              0.553
DR93_1650
Tyr_phenol_ly- tyrosine phenol-lyase (458 aa)
           
  0.546
serS
Seryl-tRNA synthetase; serS- serine--tRNA ligase (428 aa)
              0.515
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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