STRINGSTRING
radA protein (Pasteurella multocida) - STRING interaction network
"radA" - Sms: DNA repair protein RadA in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
radASms- DNA repair protein RadA (459 aa)    
Predicted Functional Partners:
dnaB
dnaB- replicative DNA helicase (467 aa)
 
   
  0.884
serB
serB- phosphoserine phosphatase SerB (320 aa)
 
      0.868
DR93_1809
annotation not available (355 aa)
              0.845
DR93_638
Conserved hypothetical protein (182 aa)
 
 
        0.789
polA
Pola- DNA polymerase I (930 aa)
 
   
  0.786
ruvB
ruvB- Holliday junction DNA helicase RuvB (335 aa)
 
   
  0.666
recA
tigrfam_recA- protein RecA (354 aa)
   
   
  0.659
recG
recG- ATP-dependent DNA helicase RecG (693 aa)
   
 
  0.639
recN
recN- DNA repair protein RecN (558 aa)
   
     
  0.636
clpX
clpX- ATP-dependent Clp protease, ATP-binding subunit ClpX (411 aa)
   
     
  0.627
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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