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lolB protein (Pasteurella multocida) - STRING interaction network
lolB: outer membrane lipoprotein LolB in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolBlolB- outer membrane lipoprotein LolB (205 aa)    
Predicted Functional Partners:
ispE
ispE- 4-(cytidine 5’-diphospho)-2-C-methyl-D-erythritol kinase (295 aa)
 
        0.958
lolA
lolA- outer membrane lipocarrier protein LolA (205 aa)
   
 
  0.934
prs
annotation not available (315 aa)
 
        0.806
pth
Pth- peptidyl-tRNA hydrolase (194 aa)
 
        0.763
DR93_1365
annotation not available (272 aa)
   
 
  0.744
argA
N-acetylglutamate synthase; N-Ac-Glu-synth- amino-acid N-acetyltransferase (440 aa)
     
        0.738
lolD
Uncharacterized protein; lolD_lipo_ex- liporeleasing system, ATP-binding protein (227 aa)
     
   
  0.732
smpA
annotation not available (137 aa)
   
   
  0.731
yaeT
Uncharacterized protein; OM_YaeT- outer membrane assembly complex, YaeT protein (791 aa)
   
 
  0.727
DR93_1812
annotation not available (203 aa)
 
          0.715
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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