purD protein (Pasteurella multocida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

purD

annotation not available (429 aa)

Predicted Functional Partners:

purL

0.999

purN

0.999

purM

0.999

purH

0.998

purF

0.998

purC

0.996

purE

0.988

guaA

0.949

purT

0.940

glyA

0.926

Your Current Organism:

Pasteurella multocida

NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
glyA	guaA	DR93_1838	DR93_1768	annotation not available	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	0.731
glyA	purC	DR93_1838	DR93_1654	annotation not available	purC- phosphoribosylaminoimidazolesuccinocarboxamide synthase	0.863
glyA	purD	DR93_1838	DR93_1839	annotation not available	annotation not available	0.926
glyA	purF	DR93_1838	DR93_1531	annotation not available	purF- amidophosphoribosyltransferase	0.602
glyA	purH	DR93_1838	DR93_1841	annotation not available	purH- phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	0.994
glyA	purL	DR93_1838	DR93_879	annotation not available	FGAM_synt- phosphoribosylformylglycinamidine synthase	0.893
glyA	purN	DR93_1838	DR93_2059	annotation not available	purN- phosphoribosylglycinamide formyltransferase	0.958
glyA	purT	DR93_1838	DR93_915	annotation not available	purT- phosphoribosylglycinamide formyltransferase 2	0.906
guaA	glyA	DR93_1768	DR93_1838	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	annotation not available	0.731
guaA	purC	DR93_1768	DR93_1654	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	purC- phosphoribosylaminoimidazolesuccinocarboxamide synthase	0.973
guaA	purD	DR93_1768	DR93_1839	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	annotation not available	0.949
guaA	purE	DR93_1768	DR93_1449	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	annotation not available	0.884
guaA	purF	DR93_1768	DR93_1531	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	purF- amidophosphoribosyltransferase	0.908
guaA	purH	DR93_1768	DR93_1841	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	purH- phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	0.938
guaA	purL	DR93_1768	DR93_879	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	FGAM_synt- phosphoribosylformylglycinamidine synthase	0.983
guaA	purM	DR93_1768	DR93_2058	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	annotation not available	0.826
guaA	purN	DR93_1768	DR93_2059	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	purN- phosphoribosylglycinamide formyltransferase	0.807
guaA	purT	DR93_1768	DR93_915	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	purT- phosphoribosylglycinamide formyltransferase 2	0.626
purC	glyA	DR93_1654	DR93_1838	purC- phosphoribosylaminoimidazolesuccinocarboxamide synthase	annotation not available	0.863
purC	guaA	DR93_1654	DR93_1768	purC- phosphoribosylaminoimidazolesuccinocarboxamide synthase	guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain	0.973

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