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rpmE2 protein (Pasteurella multocida) - STRING interaction network
"rpmE2" - L31: ribosomal protein L31 in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmE2L31- ribosomal protein L31 (88 aa)    
Predicted Functional Partners:
DR93_1844
rpmJ_bact- ribosomal protein L36 (46 aa)
 
 
  0.959
rpmB
L28- ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family (78 aa)
 
 
  0.943
rpmG
rpmG_bact- ribosomal protein L33 (56 aa)
 
 
  0.839
rpmI
rpmI_bact- ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family (65 aa)
   
 
  0.831
rpsT
S20- ribosomal protein S20 (87 aa)
   
 
  0.828
rpsJ
rpsJ_bact- ribosomal protein S10 (103 aa)
     
 
  0.818
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (101 aa)
 
 
  0.815
rpsP
S16- ribosomal protein S16 (82 aa)
   
 
  0.813
DR93_822
L31- ribosomal protein L31 (70 aa)
         
    0.800
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (75 aa)
   
 
  0.786
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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