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DR93_1844 protein (Pasteurella multocida) - STRING interaction network
"DR93_1844" - rpmJ_bact: ribosomal protein L36 in Pasteurella multocida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1844rpmJ_bact- ribosomal protein L36 (46 aa)    
Predicted Functional Partners:
rpmE2
L31- ribosomal protein L31 (88 aa)
 
 
  0.959
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site (101 aa)
   
 
  0.928
ompA
annotation not available (352 aa)
     
 
  0.920
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (75 aa)
     
 
  0.900
rpsH
annotation not available (130 aa)
   
 
  0.897
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (129 aa)
   
 
  0.895
rpsM
bact_S13- 30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family (118 aa)
   
 
  0.894
rplO
50S ribosomal protein L15; Binds to the 23S rRNA (144 aa)
   
 
  0.892
rpsE
rpsE_bact- ribosomal protein S5 (166 aa)
   
 
  0.892
rpmC
L29- ribosomal protein L29 (63 aa)
   
 
  0.890
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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