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DR93_1856 protein (Pasteurella multocida) - STRING interaction network
"DR93_1856" - sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_1856sigma70-ECF- RNA polymerase sigma factor, sigma-70 family protein (183 aa)    
Predicted Functional Partners:
DR93_1855
Conserved hypothetical protein (66 aa)
              0.845
arcB
annotation not available (618 aa)
     
 
  0.616
DR93_149
MclA; Anti sigma-E RseA, N-terminal domain protein (196 aa)
   
 
  0.599
DR93_233
annotation not available (861 aa)
     
 
  0.503
secG
secG- preprotein translocase, SecG subunit (115 aa)
              0.469
DR93_1853
Uncharacterized protein (306 aa)
 
          0.456
rseB
annotation not available (317 aa)
   
 
  0.441
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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