STRINGSTRING
topB protein (Pasteurella multocida) - STRING interaction network
"topB" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
topBannotation not available (650 aa)    
Predicted Functional Partners:
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (200 aa)
   
   
  0.865
recQ
recQ- ATP-dependent DNA helicase RecQ (632 aa)
 
 
 
  0.677
polA
Pola- DNA polymerase I (930 aa)
   
 
  0.661
DR93_669
annotation not available (341 aa)
   
   
  0.618
selD
Selenophosphate synthetase; selD- selenide, water dikinase (343 aa)
 
        0.616
DR93_1503
annotation not available (184 aa)
       
  0.596
DR93_954
annotation not available (646 aa)
           
  0.579
bioB
bioB- biotin synthase (336 aa)
         
  0.565
DR93_816
Radc- DNA repair RadC family protein (214 aa)
 
     
  0.551
DR93_513
annotation not available (185 aa)
       
  0.530
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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