STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (200 aa)    
Predicted Functional Partners:
DR93_1861
DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family
 
  
 0.955
recG
recG: ATP-dependent DNA helicase RecG
  
  
 0.880
topB
annotation not available
  
  
 0.865
recO
Reco: DNA repair protein RecO; Belongs to the RecO family
  
 
 0.813
recN
recN: DNA repair protein RecN
 
   
 0.805
ruvB
ruvB: Holliday junction DNA helicase RuvB
 
  
 0.763
ruvA
ruvA: Holliday junction DNA helicase RuvA
 
 
 0.752
polA
Pola: DNA polymerase I
  
 
 0.744
uvrB
Uvrb: excinuclease ABC subunit B
  
 
 0.740
recF
Recf: DNA replication and repair RecF family protein
 
  
 0.738
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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