STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frdDannotation not available (116 aa)    
Predicted Functional Partners:
frdB
annotation not available
 
 0.999
frdC
annotation not available
 
 0.999
frdA
fum_red_Fp: fumarate reductase, flavoprotein subunit
 
 0.998
fumC
fumC_II: fumarate hydratase, class II
     
 0.939
sucD
Uncharacterized protein; sucCoAalpha: succinate-CoA ligase, alpha subunit
     
 0.912
sucC
annotation not available
     
 0.912
gabD
annotation not available
     
  0.900
DR93_1451
annotation not available
     
  0.800
DR93_2026
Aminotransferase AlaT
     
  0.800
argH
argH: argininosuccinate lyase
     
  0.800
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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