STRINGSTRING
lptF protein (Pasteurella multocida) - STRING interaction network
"lptF" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lptFannotation not available (368 aa)    
Predicted Functional Partners:
lptG
annotation not available (356 aa)
 
  0.999
lptB
annotation not available (241 aa)
 
  0.991
lptD
annotation not available (782 aa)
 
 
  0.751
DR93_1893
annotation not available (192 aa)
 
 
  0.720
DR93_1871
Cytosol aminopeptidase family, N-terminal domain protein (494 aa)
   
        0.689
yaeT
Uncharacterized protein; OM_YaeT- outer membrane assembly complex, YaeT protein (791 aa)
 
      0.636
lolA
lolA- outer membrane lipocarrier protein LolA (205 aa)
 
 
  0.625
tolQ
tolQ- protein TolQ (225 aa)
   
 
      0.555
mreC
mreC- rod shape-determining protein MreC (349 aa)
   
      0.527
lptA
outer_YhbN_LptA- lipopolysaccharide transport periplasmic protein LptA (170 aa)
 
 
  0.510
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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