STRINGSTRING
queD protein (Pasteurella multocida) - STRING interaction network
"queD" - queuosine_QueD: queuosine biosynthesis protein QueD in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
queDqueuosine_QueD- queuosine biosynthesis protein QueD (141 aa)    
Predicted Functional Partners:
DR93_1882
annotation not available (209 aa)
 
   
  0.996
queC
7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)); Belongs to the QueC family (228 aa)
 
     
  0.966
folE
folE- GTP cyclohydrolase I; Belongs to the GTP cyclohydrolase I family (218 aa)
   
 
  0.947
nudB
annotation not available (172 aa)
       
    0.900
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (279 aa)
 
     
  0.785
yqaB
annotation not available (199 aa)
            0.750
hisE
Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family (201 aa)
         
  0.710
guaA
guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain (523 aa)
         
  0.621
ribD
eubact_ribD- riboflavin biosynthesis protein RibD (376 aa)
         
  0.529
queA
S-adenosylmethionine-tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (363 aa)
 
   
  0.526
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (14%) [HD]