lptB protein (Pasteurella multocida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

lptB

annotation not available (241 aa)

Predicted Functional Partners:

lptG

0.992

lptF

0.991

DR93_1893

0.963

lptA

0.958

ptsN

0.895

DR93_1897

0.815

DR93_1891

0.672

DR93_1892

0.633

lpxA

0.629

DR93_1300

0.609

Your Current Organism:

Pasteurella multocida

NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR93_1300	DR93_1891	DR93_1300	DR93_1891	kpsF: sugar isomerase, KpsF/GutQ family protein	annotation not available	0.438
DR93_1300	DR93_1893	DR93_1300	DR93_1893	kpsF: sugar isomerase, KpsF/GutQ family protein	annotation not available	0.500
DR93_1300	lptB	DR93_1300	DR93_1895	kpsF: sugar isomerase, KpsF/GutQ family protein	annotation not available	0.609
DR93_1300	lptF	DR93_1300	DR93_1870	kpsF: sugar isomerase, KpsF/GutQ family protein	annotation not available	0.441
DR93_1300	lptG	DR93_1300	DR93_1869	kpsF: sugar isomerase, KpsF/GutQ family protein	annotation not available	0.480
DR93_1300	lpxA	DR93_1300	DR93_2103	kpsF: sugar isomerase, KpsF/GutQ family protein	lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase	0.843
DR93_1891	DR93_1300	DR93_1891	DR93_1300	annotation not available	kpsF: sugar isomerase, KpsF/GutQ family protein	0.438
DR93_1891	DR93_1892	DR93_1891	DR93_1892	annotation not available	Uncharacterized protein	0.999
DR93_1891	DR93_1893	DR93_1891	DR93_1893	annotation not available	annotation not available	0.610
DR93_1891	DR93_1897	DR93_1891	DR93_1897	annotation not available	Uncharacterized protein	0.573
DR93_1891	lptA	DR93_1891	DR93_1894	annotation not available	outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA	0.612
DR93_1891	lptB	DR93_1891	DR93_1895	annotation not available	annotation not available	0.672
DR93_1891	ptsN	DR93_1891	DR93_1896	annotation not available	Uncharacterized protein; nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN	0.611
DR93_1892	DR93_1891	DR93_1892	DR93_1891	Uncharacterized protein	annotation not available	0.999
DR93_1892	DR93_1893	DR93_1892	DR93_1893	Uncharacterized protein	annotation not available	0.613
DR93_1892	DR93_1897	DR93_1892	DR93_1897	Uncharacterized protein	Uncharacterized protein	0.573
DR93_1892	lptA	DR93_1892	DR93_1894	Uncharacterized protein	outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA	0.612
DR93_1892	lptB	DR93_1892	DR93_1895	Uncharacterized protein	annotation not available	0.633
DR93_1892	ptsN	DR93_1892	DR93_1896	Uncharacterized protein	Uncharacterized protein; nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN	0.611
DR93_1893	DR93_1300	DR93_1893	DR93_1300	annotation not available	kpsF: sugar isomerase, KpsF/GutQ family protein	0.500

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