STRINGSTRING
lptB protein (Pasteurella multocida) - STRING interaction network
"lptB" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lptBannotation not available (241 aa)    
Predicted Functional Partners:
lptG
annotation not available (356 aa)
 
 
  0.992
lptF
annotation not available (368 aa)
 
  0.991
DR93_1893
annotation not available (192 aa)
 
 
  0.963
lptA
outer_YhbN_LptA- lipopolysaccharide transport periplasmic protein LptA (170 aa)
 
   
  0.958
ptsN
Uncharacterized protein; nitro_reg_IIA- PTS IIA-like nitrogen-regulatory protein PtsN (172 aa)
 
        0.895
DR93_1897
Uncharacterized protein (288 aa)
 
        0.815
DR93_1891
annotation not available (261 aa)
          0.672
DR93_1892
Uncharacterized protein (264 aa)
 
       
0.633
lpxA
lipid_A_lpxA- acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (262 aa)
 
   
  0.629
DR93_1300
kpsF- sugar isomerase, KpsF/GutQ family protein (311 aa)
        0.609
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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