STRINGSTRING
pth protein (Pasteurella multocida) - STRING interaction network
"pth" - Pth: peptidyl-tRNA hydrolase in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pthPth- peptidyl-tRNA hydrolase (194 aa)    
Predicted Functional Partners:
engD
annotation not available (363 aa)
   
  0.938
ispE
ispE- 4-(cytidine 5’-diphospho)-2-C-methyl-D-erythritol kinase (295 aa)
 
        0.822
lolB
lolB- outer membrane lipoprotein LolB (205 aa)
 
        0.763
frr
Frr- ribosome recycling factor (185 aa)
   
   
  0.737
prfA
prfA- peptide chain release factor 1 (360 aa)
 
   
  0.735
prs
annotation not available (315 aa)
 
      0.664
lepA
lepA- GTP-binding protein LepA (598 aa)
 
   
  0.662
prmC
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; RF_mod_PrmC- protein-(glutamine-N5) methyltransferase, release factor-specific (298 aa)
 
        0.597
DR93_1901
annotation not available (146 aa)
              0.591
rnfH
annotation not available (99 aa)
              0.591
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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