STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
murCmurC: UDP-N-acetylmuramate--alanine ligase (481 aa)    
Predicted Functional Partners:
ddl
D_ala_D_alaTIGR: D-alanine--D-alanine ligase family protein
 
 0.996
murG
murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
  
 0.995
murB
murB: UDP-N-acetylenolpyruvoylglucosamine reductase
 0.993
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase
0.990
murE
annotation not available
 
 0.986
mraY
mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase
  
 0.982
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
  
 0.981
DR93_1930
annotation not available
 
 0.974
ftsW
ftsW: cell division protein FtsW
  
 0.958
DR93_1921
annotation not available
  
  
 0.934
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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