STRINGSTRING
hflC protein (Pasteurella multocida) - STRING interaction network
hflC: HflC protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hflChflC- HflC protein (295 aa)    
Predicted Functional Partners:
hflK
Protein HflK; HflC and HflK could encode or regulate a protease (415 aa)
   
0.995
miaA
miaA- tRNA dimethylallyltransferase (316 aa)
   
  0.923
hflX
GTP_HflX- GTP-binding protein HflX (448 aa)
 
   
  0.916
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (96 aa)
 
   
  0.851
ftsH
annotation not available (639 aa)
   
 
  0.615
dnaK
prok_dnaK- chaperone protein DnaK; Belongs to the heat shock protein 70 family (634 aa)
   
 
  0.573
rpsG
rpsG_bact- ribosomal protein S7 (156 aa)
     
   
  0.511
rpsC
rpsC_bact- ribosomal protein S3 (235 aa)
     
 
  0.494
DR93_1950
annotation not available (240 aa)
              0.471
rpoA
rpoA- DNA-directed RNA polymerase, alpha subunit (329 aa)
     
   
  0.469
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (15%) [HD]