STRINGSTRING
hflK protein (Pasteurella multocida) - STRING interaction network
"hflK" - Protein HflK in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hflKProtein HflK; HflC and HflK could encode or regulate a protease (415 aa)    
Predicted Functional Partners:
hflC
hflC- HflC protein (295 aa)
   
0.995
hflX
GTP_HflX- GTP-binding protein HflX (448 aa)
 
   
  0.922
miaA
miaA- tRNA dimethylallyltransferase (316 aa)
   
  0.922
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (96 aa)
 
   
  0.858
ftsH
annotation not available (639 aa)
   
 
  0.619
groS
annotation not available (96 aa)
 
   
  0.551
DR93_1950
annotation not available (240 aa)
              0.471
DR93_945
annotation not available (631 aa)
   
 
  0.434
rrmJ
rrmJ- ribosomal RNA large subunit methyltransferase J (209 aa)
   
      0.407
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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