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rdgC protein (Pasteurella multocida) - STRING interaction network
"rdgC" - Recombination-associated protein RdgC in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rdgCRecombination-associated protein RdgC; May be involved in recombination (302 aa)    
Predicted Functional Partners:
xerD
recomb_XerD- tyrosine recombinase XerD; Belongs to the ’phage’ integrase family (297 aa)
              0.599
DR93_1979
annotation not available (385 aa)
              0.599
proC
proC- pyrroline-5-carboxylate reductase (275 aa)
              0.599
DR93_120
annotation not available (151 aa)
 
     
  0.564
DR93_1976
annotation not available (247 aa)
              0.509
DR93_1947
Uncharacterized protein; Belongs to the UPF0307 family (180 aa)
   
          0.503
sbcB
Exonuclease C-terminal family protein (475 aa)
   
          0.501
recF
Recf- DNA replication and repair RecF family protein (358 aa)
           
  0.459
gyrB
gyrB- DNA gyrase, B subunit (806 aa)
     
   
  0.449
gltX
Glutamyl-tRNA synthetase; gltX_bact- glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (480 aa)
           
  0.439
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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