STRINGSTRING
raiA protein (Pasteurella multocida) - STRING interaction network
"raiA" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
raiAannotation not available (105 aa)    
Predicted Functional Partners:
rplP
rplP_bact- ribosomal protein L16 (136 aa)
     
 
  0.739
rpmH
rpmH_bact- ribosomal protein L34 (44 aa)
     
 
  0.678
rpsJ
rpsJ_bact- ribosomal protein S10 (103 aa)
     
      0.678
rpmC
L29- ribosomal protein L29 (63 aa)
     
      0.677
rpmD
rpmD_bact- ribosomal protein L30 (59 aa)
       
      0.667
rpsG
rpsG_bact- ribosomal protein S7 (156 aa)
       
 
  0.645
rplV
50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (110 aa)
       
 
  0.637
rpsU
S21p- ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family (71 aa)
     
 
  0.630
rpsE
rpsE_bact- ribosomal protein S5 (166 aa)
     
 
  0.588
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (116 aa)
   
      0.587
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (16%) [HD]