STRINGSTRING
rppH protein (Pasteurella multocida) - STRING interaction network
"rppH" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rppHannotation not available (198 aa)    
Predicted Functional Partners:
thyA
Thym_sym- thymidylate synthase (283 aa)
 
      0.969
lgt
Prolipoprotein diacylglyceryl transferase; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (267 aa)
 
        0.962
DR93_1992
annotation not available (264 aa)
              0.876
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine (274 aa)
   
 
  0.838
DR93_1995
annotation not available (166 aa)
   
   
  0.807
orn
annotation not available (184 aa)
   
   
  0.531
tolB
Translocation protein TolB; propeller_TolB- Tol-Pal system beta propeller repeat protein TolB (432 aa)
 
          0.493
DR93_1298
annotation not available (160 aa)
   
          0.469
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (89 aa)
   
 
  0.467
pcnB
annotation not available (501 aa)
   
   
  0.465
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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