STRINGSTRING
pepD protein (Pasteurella multocida) - STRING interaction network
"pepD" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepDannotation not available (486 aa)    
Predicted Functional Partners:
gshAB
Glu_cys_lig_rel- glutamate--cysteine ligase/gamma-glutamylcysteine synthetase; Belongs to the glutamate--cysteine ligase type 1 family (757 aa)
       
  0.913
pepN
pepN_proteo- aminopeptidase N (869 aa)
     
 
  0.827
DR93_1871
Cytosol aminopeptidase family, N-terminal domain protein (494 aa)
     
  0.824
pepB
annotation not available (432 aa)
     
  0.823
cysK
cysK- cysteine synthase A (315 aa)
   
 
  0.821
metC
cysta_beta_ly_B- cystathionine beta-lyase (398 aa)
     
 
  0.809
DR93_1451
annotation not available (396 aa)
   
 
    0.807
glyA
annotation not available (420 aa)
     
 
  0.806
DR93_216
C_S_lyase_PatB- C-S lyase family protein (396 aa)
       
  0.805
gpt
annotation not available (153 aa)
              0.571
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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