STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_2025Isochor_syn: isochorismate synthase family protein (431 aa)    
Predicted Functional Partners:
menD
menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase
 
 0.999
menH
menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
   
 0.962
trpG
annotation not available
 
 0.946
DR93_1916
Uncharacterized protein; CM_P_1: chorismate mutase
 
 
 0.926
DR93_1065
annotation not available
    
 0.917
aroC
aroC: chorismate synthase
 
  
 0.917
tyrA
annotation not available
  
 
 0.910
menC
menC_gamma/gm+: o-succinylbenzoate synthase
  
 0.901
trpE
trpE_proteo: anthranilate synthase component I
  
 
0.858
DR93_1678
hisC: histidinol-phosphate transaminase
   
 
 0.810
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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