STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_2048annotation not available (278 aa)    
Predicted Functional Partners:
DR93_2049
Cytochrome c-type biogenesis protein; Possible subunit of a heme lyase
  
 0.971
DR93_2051
nrfE: cytochrome c-type biogenesis protein CcmF
 
 0.941
nrfD
Uncharacterized protein; cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit
 
  
 0.925
DR93_2050
DsbE; Thiol:disulfide interchange protein DsbE
 
  
 0.913
nrfB
cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit
 
  
 0.911
DR93_2055
Cytochrome c-552; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family
 
   
 0.796
nrfC
NrfC; cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein
 
  
 0.785
napH
Quinol dehydrogenase membrane component; napH_: ferredoxin-type , NapH/MauN family protein
  
  
 0.709
DR93_2070
annotation not available
 
 
 0.639
DR93_2047
Uncharacterized protein
       0.631
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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