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cpdB protein (Pasteurella multocida) - STRING interaction network
"cpdB" - Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein in Pasteurella multocida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpdBBifunctional 2’,3’-cyclic nucleotide 2’-phosphodiesterase/3’-nucleotidase periplasmic protein; cycNucDiestase- 2’,3’-cyclic-nucleotide 2’-phosphodiesterase (656 aa)    
Predicted Functional Partners:
ushA
annotation not available (549 aa)
   
   
0.935
yjjG
annotation not available (223 aa)
       
  0.927
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2’-deoxycytidine for UMP synthesis (297 aa)
 
 
    0.921
udk
Udk- uridine kinase (216 aa)
 
 
    0.914
udp
Uridine-psphlse- uridine phosphorylase; Belongs to the PNP/UDP phosphorylase family (252 aa)
   
 
  0.910
iunh
annotation not available (310 aa)
 
 
    0.905
deoD
deoD- purine nucleoside phosphorylase (238 aa)
   
 
    0.902
surE
5’(3’)-nucleotidase/polyphosphatase; surE- 5’/3’-nucleotidase SurE (246 aa)
         
    0.900
DR93_389
Uncharacterized protein; HAD-SF-IA-v3- HAD hydrolase, IA, variant 3 family protein (215 aa)
         
    0.900
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (214 aa)
              0.479
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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