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pilF protein (Pasteurella multocida) - STRING interaction network
"pilF" - type_IV_pilW: type IV pilus biogenesis/stability protein PilW in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilFtype_IV_pilW- type IV pilus biogenesis/stability protein PilW (181 aa)    
Predicted Functional Partners:
rlmN
23S rRNA m2A2503 methyltransferase (394 aa)
   
        0.787
DR93_2091
annotation not available (318 aa)
 
        0.732
pilQ
ComE; IV_pilus_PilQ- type IV pilus secretin PilQ family protein; Belongs to the GSP D family (444 aa)
   
     
  0.675
DR93_2088
Uncharacterized protein (203 aa)
 
        0.664
ispG
ispG_gcpE- 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (367 aa)
   
        0.623
hisS
Histidyl-tRNA synthetase; hisS- histidine--tRNA ligase (423 aa)
   
        0.589
DR93_1987
annotation not available (403 aa)
   
     
  0.565
DR93_1015
Uncharacterized protein (237 aa)
   
     
  0.540
DR93_2094
Uncharacterized protein (417 aa)
              0.430
glnB
annotation not available (112 aa)
              0.422
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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