STRINGSTRING
lpxD protein (Pasteurella multocida) - STRING interaction network
"lpxD" - lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpxDlipid_A_lpxD- UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (342 aa)    
Predicted Functional Partners:
lpxB
lpxB- lipid-A-disaccharide synthase (392 aa)
 
 
  0.997
lpxC
UDP-3-O-acyl-N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family (305 aa)
 
 
  0.994
fabZ
fabZ- beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ (152 aa)
 
   
  0.987
lpxH
lipid_A_lpxH- UDP-2,3-diacylglucosamine hydrolase (239 aa)
   
   
  0.983
lpxA
lipid_A_lpxA- acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (262 aa)
 
0.971
lpxK
Tetraacyldisaccharide 4’-kinase; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (325 aa)
 
 
  0.954
skp
annotation not available (193 aa)
   
 
  0.947
acpP
Acyl_carrier- acyl carrier protein (76 aa)
   
 
  0.932
waaA
annotation not available (427 aa)
 
   
  0.921
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase; KDO8P_synth- 3-deoxy-8-phosphooctulonate synthase (284 aa)
 
   
  0.914
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (14%) [HD]