STRINGSTRING
skp protein (Pasteurella multocida) - STRING interaction network
"skp" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
skpannotation not available (193 aa)    
Predicted Functional Partners:
lpxD
lipid_A_lpxD- UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (342 aa)
   
 
  0.947
ompA
annotation not available (352 aa)
 
 
  0.901
yaeT
Uncharacterized protein; OM_YaeT- outer membrane assembly complex, YaeT protein (791 aa)
 
 
  0.868
DR93_918
NlpB protein (337 aa)
   
   
  0.747
DR93_1893
annotation not available (192 aa)
 
          0.738
rseP
annotation not available (442 aa)
 
   
  0.712
DR93_1029
asmA-like C-terminal region family protein (404 aa)
   
          0.703
DR93_1047
annotation not available (271 aa)
   
          0.699
DR93_149
MclA; Anti sigma-E RseA, N-terminal domain protein (196 aa)
   
     
  0.694
DR93_1975
Opacity-associated A N-terminal motif family protein (388 aa)
   
          0.691
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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