STRINGSTRING
frr protein (Pasteurella multocida) - STRING interaction network
"frr" - Frr: ribosome recycling factor in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frrFrr- ribosome recycling factor (185 aa)    
Predicted Functional Partners:
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (116 aa)
 
 
  0.987
rplM
rplM_bact- ribosomal protein L13 (142 aa)
 
 
  0.982
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (117 aa)
 
 
  0.981
rpsI
annotation not available (130 aa)
 
 
  0.977
rpsB
rpsB_bact- ribosomal protein S2 (240 aa)
 
 
  0.973
rplA
rplA_bact- ribosomal protein L1; Belongs to the universal ribosomal protein uL1 family (229 aa)
 
 
  0.968
rpsM
bact_S13- 30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family (118 aa)
   
 
  0.966
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (209 aa)
   
 
  0.965
rpmA
L27- ribosomal protein L27 (85 aa)
 
 
  0.963
rplE
annotation not available (179 aa)
   
 
  0.961
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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