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DR93_2120 protein (Pasteurella multocida) - STRING interaction network
"DR93_2120" - IbeB in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_2120IbeB; outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (463 aa)    
Predicted Functional Partners:
DR93_2118
ccmA- heme ABC exporter, ATP-binding protein CcmA (910 aa)
 
     
  0.960
DR93_2117
annotation not available (321 aa)
 
 
  0.959
DR93_2119
annotation not available (374 aa)
 
     
  0.943
ompA
annotation not available (352 aa)
   
 
  0.838
macB
annotation not available (648 aa)
 
 
  0.836
DR93_833
annotation not available (1032 aa)
 
  0.826
DR93_972
Uncharacterized protein; RND_mfp- efflux transporter, RND family, MFP subunit (375 aa)
 
 
  0.719
arcB
annotation not available (618 aa)
       
 
  0.527
yaeT
Uncharacterized protein; OM_YaeT- outer membrane assembly complex, YaeT protein (791 aa)
 
 
  0.517
DR93_831
Uncharacterized protein; RND_mfp- efflux transporter, RND family, MFP subunit (403 aa)
 
 
  0.503
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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