STRINGSTRING
xylB protein (Pasteurella multocida) - STRING interaction network
"xylB" - Uncharacterized protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBUncharacterized protein; xylB- xylulokinase (489 aa)    
Predicted Functional Partners:
xylA
xylose_isom_A- xylose isomerase (440 aa)
 
 
  0.996
araD
araD- L-ribulose-5-phosphate 4-epimerase (231 aa)
 
   
  0.954
DR93_469
Rpe- ribulose-phosphate 3-epimerase (223 aa)
 
 
  0.920
DR93_524
annotation not available (231 aa)
     
  0.916
DR93_224
Uncharacterized protein (227 aa)
       
    0.902
xylF
xylF- D-xylose ABC transporter, D-xylose-binding protein (332 aa)
 
     
  0.682
DR93_221
annotation not available (389 aa)
 
 
  0.526
hslV
ATP_dep_HslV- ATP-dependent protease HslVU, peptidase subunit (176 aa)
           
  0.517
nhaC
antiport_nhaC- Na+/H+ antiporter NhaC (467 aa)
 
          0.491
galM
Galactose-1-epimerase; galM_Leloir- galactose mutarotase (343 aa)
 
   
  0.479
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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