Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnaN | dut | DR93_808 | DR93_814 | Dnan- DNA polymerase III, beta subunit | Deoxyuridine 5’-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism- it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA | 0.838 |
| dnaN | polA | DR93_808 | DR93_900 | Dnan- DNA polymerase III, beta subunit | Pola- DNA polymerase I | 0.994 |
| dnaN | ssb | DR93_808 | DR93_2148 | Dnan- DNA polymerase III, beta subunit | annotation not available | 0.684 |
| dnaN | uvrA | DR93_808 | DR93_2147 | Dnan- DNA polymerase III, beta subunit | Uvra- excinuclease ABC subunit A | 0.525 |
| dut | dnaN | DR93_814 | DR93_808 | Deoxyuridine 5’-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism- it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA | Dnan- DNA polymerase III, beta subunit | 0.838 |
| dut | ssb | DR93_814 | DR93_2148 | Deoxyuridine 5’-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism- it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA | annotation not available | 0.700 |
| polA | dnaN | DR93_900 | DR93_808 | Pola- DNA polymerase I | Dnan- DNA polymerase III, beta subunit | 0.994 |
| polA | priA | DR93_900 | DR93_828 | Pola- DNA polymerase I | priA- primosomal protein N’ | 0.853 |
| polA | rplU | DR93_900 | DR93_1121 | Pola- DNA polymerase I | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 | 0.649 |
| polA | rpsD | DR93_900 | DR93_244 | Pola- DNA polymerase I | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | 0.616 |
| polA | ssb | DR93_900 | DR93_2148 | Pola- DNA polymerase I | annotation not available | 0.830 |
| polA | uvrA | DR93_900 | DR93_2147 | Pola- DNA polymerase I | Uvra- excinuclease ABC subunit A | 0.821 |
| priA | polA | DR93_828 | DR93_900 | priA- primosomal protein N’ | Pola- DNA polymerase I | 0.853 |
| priA | ssb | DR93_828 | DR93_2148 | priA- primosomal protein N’ | annotation not available | 0.687 |
| rplU | polA | DR93_1121 | DR93_900 | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 | Pola- DNA polymerase I | 0.649 |
| rplU | rpsD | DR93_1121 | DR93_244 | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit | 0.989 |
| rplU | rpsF | DR93_1121 | DR93_787 | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA | 0.992 |
| rplU | rpsK | DR93_1121 | DR93_245 | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome | 0.992 |
| rplU | rpsR | DR93_1121 | DR93_789 | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit | 0.994 |
| rplU | ssb | DR93_1121 | DR93_2148 | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 | annotation not available | 0.743 |
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