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xylF protein (Pasteurella multocida) - STRING interaction network
xylF: D-xylose ABC transporter, D-xylose-binding protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylFxylF- D-xylose ABC transporter, D-xylose-binding protein (332 aa)    
Predicted Functional Partners:
DR93_220
annotation not available (375 aa)
 
  0.993
xylG
xylG- D-xylose ABC transporter, ATP-binding protein (504 aa)
 
 
  0.980
DR93_221
annotation not available (389 aa)
 
   
  0.877
xylA
xylose_isom_A- xylose isomerase (440 aa)
 
 
  0.820
xylB
Uncharacterized protein; xylB- xylulokinase (489 aa)
 
     
  0.682
mglB
annotation not available (330 aa)
   
   
  0.647
DR93_932
annotation not available (334 aa)
     
   
  0.606
DR93_1915
annotation not available (337 aa)
     
   
  0.597
nhaC
antiport_nhaC- Na+/H+ antiporter NhaC (467 aa)
              0.444
DR93_216
C_S_lyase_PatB- C-S lyase family protein (396 aa)
              0.435
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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