STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_223Uncharacterized protein; cbbA: ketose-bisphosphate aldolase family protein (294 aa)    
Predicted Functional Partners:
DR93_722
Uncharacterized protein; Tim: triose-phosphate isomerase
  
 
 0.963
DR93_559
Tim: triose-phosphate isomerase
  
 
 0.961
gap
GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I
  
 0.953
tkt
Transketolase; Tktlase_bact: transketolase
  
 
 0.943
pfkA
PFKA_ATP: 6-phosphofructokinase
 
 
 0.936
pyk
Pyruv_kin: pyruvate kinase; Belongs to the pyruvate kinase family
  
 
 0.933
pfkB
pfkB: 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family
 
 
 0.932
eno
Enolase; Eno: phosphopyruvate hydratase
  
 0.920
DR93_1051
annotation not available
  
 
 0.919
DR93_141
Uncharacterized protein; FRU: PTS system, Fru family, IIB component domain protein
  
 
 0.919
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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