STRINGSTRING
rplP protein (Pasteurella multocida) - STRING interaction network
rplP_bact: ribosomal protein L16 in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rplPrplP_bact- ribosomal protein L16 (136 aa)    
Predicted Functional Partners:
rpsC
rpsC_bact- ribosomal protein S3 (235 aa)
 
  0.999
rplB
rplB_bact- ribosomal protein L2 (273 aa)
 
  0.999
rplV
50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g., L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (110 aa)
 
 
  0.999
rplD
rplD_bact- 50S ribosomal protein L4 (200 aa)
 
 
  0.999
rpsH
annotation not available (130 aa)
 
  0.999
rpsS
rpsS_bact- ribosomal protein S19 (91 aa)
 
 
  0.999
rpsQ
S17_bact- 30S ribosomal protein S17 (85 aa)
 
 
  0.999
rpsJ
rpsJ_bact- ribosomal protein S10 (103 aa)
 
 
  0.999
rplE
annotation not available (179 aa)
 
 
  0.998
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (177 aa)
 
 
  0.998
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (17%) [HD]