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oppD protein (Pasteurella multocida) - STRING interaction network
"oppD" - oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppDoligo_HPY- oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein (330 aa)    
Predicted Functional Partners:
oppC
annotation not available (303 aa)
  0.998
oppB
annotation not available (306 aa)
  0.991
DR93_28
oligo_HPY- oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein (329 aa)
 
0.980
oppA
annotation not available (548 aa)
  0.978
DR93_1822
annotation not available (297 aa)
 
  0.882
DR93_1510
annotation not available (523 aa)
 
 
  0.760
DR93_1754
annotation not available (321 aa)
 
          0.728
DR93_1823
annotation not available (334 aa)
 
  0.727
sapC
annotation not available (295 aa)
          0.657
serC
3-phosphoserine/phosphohydroxythreonine aminotransferase; serC_1- phosphoserine transaminase (360 aa)
           
  0.574
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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