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gyrB protein (Pasteurella multocida) - STRING interaction network
gyrB: DNA gyrase, B subunit in Pasteurella multocida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gyrBgyrB- DNA gyrase, B subunit (806 aa)    
Predicted Functional Partners:
gyrA
gyrA- DNA gyrase, A subunit (885 aa)
 
  0.997
parC
parC_Gneg- DNA topoisomerase IV, A subunit (750 aa)
 
  0.960
dnaN
Dnan- DNA polymerase III, beta subunit (366 aa)
 
  0.911
recF
Recf- DNA replication and repair RecF family protein (358 aa)
 
   
  0.909
dnaJ
dnaJ_bact- chaperone protein DnaJ (372 aa)
   
 
  0.890
yacG
DNA gyrase inhibitor YacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase (67 aa)
       
 
  0.890
dnaK
prok_dnaK- chaperone protein DnaK; Belongs to the heat shock protein 70 family (634 aa)
   
 
  0.880
recA
tigrfam_recA- protein RecA (354 aa)
     
 
  0.806
rpoB
rpoB- DNA-directed RNA polymerase, beta subunit (1342 aa)
   
   
  0.781
leuS
Leucyl-tRNA synthetase; leuS_bact- leucine--tRNA ligase (860 aa)
 
   
  0.781
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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