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atpF protein (Pasteurella multocida) - STRING interaction network
"atpF" - F0F1 ATP synthase subunit B in Pasteurella multocida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
atpFF0F1 ATP synthase subunit B; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (156 aa)    
Predicted Functional Partners:
atpH
ATP_synt_delta- ATP synthase F1, delta subunit (177 aa)
  0.999
atpA
atpA- ATP synthase F1, alpha subunit (513 aa)
  0.999
atpB
ATP_synt_6_or_A- ATP synthase F0, A subunit (264 aa)
  0.999
atpG
ATPsyn_F1gamma- ATP synthase F1, gamma subunit (289 aa)
 
  0.999
atpD
atpD- ATP synthase F1, beta subunit (457 aa)
  0.999
atpE
Uncharacterized protein; ATP_synt_c- ATP synthase F0, C subunit (84 aa)
 
  0.999
atpC
ATP_synt_epsi- ATP synthase F1, epsilon subunit (142 aa)
 
  0.999
ppa
annotation not available (175 aa)
     
 
    0.908
gidB
gidB- 16S rRNA (guanine(527)-N(7))-methyltransferase GidB (210 aa)
 
        0.870
rplR
L18_bact- ribosomal protein L18 (117 aa)
     
        0.852
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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