STRINGSTRING
comM protein (Pasteurella multocida) - STRING interaction network
"comM" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comMannotation not available (509 aa)    
Predicted Functional Partners:
def
Uncharacterized protein; Pept_deformyl- peptide deformylase (170 aa)
          0.838
dprA
dprA- DNA protecting protein DprA (373 aa)
 
  0.793
DR93_400
annotation not available (228 aa)
 
   
  0.786
znuB
annotation not available (261 aa)
 
        0.744
DR93_738
annotation not available (171 aa)
           
  0.594
ysxC
GTPase_YsxC- ribosome biogenesis GTP-binding protein YsxC (205 aa)
   
        0.585
DR93_1477
UPF0102 protein AAUPMC_06957; Belongs to the UPF0102 family (119 aa)
 
        0.583
ruvC
ruvC- crossover junction endodeoxyribonuclease RuvC (190 aa)
 
     
  0.455
pilQ
ComE; IV_pilus_PilQ- type IV pilus secretin PilQ family protein; Belongs to the GSP D family (444 aa)
           
  0.442
DR93_361
Uncharacterized protein (289 aa)
              0.410
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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