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trmL protein (Pasteurella multocida) - STRING interaction network
"trmL" - tRNA_yibK_trmL: tRNA in Pasteurella multocida
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trmLtRNA_yibK_trmL- tRNA (cytidine(34)-2’-O)-methyltransferase (158 aa)    
Predicted Functional Partners:
rlmH
Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family (144 aa)
   
   
  0.642
rlmL
annotation not available (719 aa)
         
  0.585
DR93_363
Conserved hypothetical protein (338 aa)
              0.584
mnmC
annotation not available (672 aa)
         
  0.581
trmU
tRNA-specific 2-thiouridylase MnmA; trmU- tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (366 aa)
   
 
  0.569
rsmE
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (244 aa)
 
   
  0.565
sun
rsmB- ribosomal RNA small subunit methyltransferase B (446 aa)
 
   
  0.550
DR93_364
Conserved hypothetical protein (506 aa)
              0.539
miaA
miaA- tRNA dimethylallyltransferase (316 aa)
         
  0.535
trmB
annotation not available (234 aa)
   
   
  0.530
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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