STRINGSTRING
gnd protein (Pasteurella multocida) - STRING interaction network
"gnd" - Gnd: 6-phosphogluconate dehydrogenase in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gndGnd- 6-phosphogluconate dehydrogenase (484 aa)    
Predicted Functional Partners:
DR93_1627
Therm_gnt_kin- carbohydrate kinase, thermoresistant glucokinase family protein (175 aa)
     
  0.992
pgl
Pgl- 6-phosphogluconolactonase (232 aa)
 
  0.990
zwf
Zwf- glucose-6-phosphate dehydrogenase (496 aa)
 
 
  0.982
rpiA
rpiA- ribose 5-phosphate isomerase A (219 aa)
 
 
  0.953
DR93_524
annotation not available (231 aa)
     
  0.929
DR93_469
Rpe- ribulose-phosphate 3-epimerase (223 aa)
     
  0.929
rpiB
Uncharacterized protein; rpiB- ribose 5-phosphate isomerase B (151 aa)
       
    0.911
DR93_723
talAB- transaldolase (316 aa)
   
 
  0.817
DR93_451
talAB- transaldolase (317 aa)
   
 
  0.817
uxuA
uxuA- mannonate dehydratase (394 aa)
         
    0.800
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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