STRINGSTRING
trkA protein (Pasteurella multocida) - STRING interaction network
"trkA" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trkAannotation not available (458 aa)    
Predicted Functional Partners:
DR93_339
TrkH; 2a38- potassium uptake , TrkH family protein (487 aa)
 
 
  0.966
mscL
mscL- large conductance mechanosensitive channel protein (133 aa)
       
  0.940
sun
rsmB- ribosomal RNA small subunit methyltransferase B (446 aa)
   
        0.936
fmt
Fmt- methionyl-tRNA formyltransferase (317 aa)
   
   
  0.890
DR93_410
annotation not available (274 aa)
   
        0.852
DR93_2100
annotation not available (618 aa)
         
  0.735
def
Uncharacterized protein; Pept_deformyl- peptide deformylase (170 aa)
   
        0.732
DR93_2075
2a37- transporter, monovalent cation-proton antiporter-2 family protein (600 aa)
   
   
  0.730
ptsN
Uncharacterized protein; nitro_reg_IIA- PTS IIA-like nitrogen-regulatory protein PtsN (172 aa)
   
 
 
  0.680
arcB
annotation not available (618 aa)
     
 
  0.579
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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