STRINGSTRING
rimO protein (Pasteurella multocida) - STRING interaction network
"rimO" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rimOannotation not available (446 aa)    
Predicted Functional Partners:
lipA
lipA- lipoyl synthase (320 aa)
   
   
  0.681
rumA
rumA- 23S rRNA (uracil-5-)-methyltransferase RumA (437 aa)
 
   
  0.674
proS
Prolyl-tRNA synthetase; proS_fam_II- proline--tRNA ligase (571 aa)
     
   
  0.655
hscA
hscA- Fe-S protein assembly chaperone HscA (620 aa)
   
   
  0.650
fdx
Fdx-1; Fdx_isc- ferredoxin, 2Fe-2S type, ISC system (111 aa)
     
   
  0.638
hscB
Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA (172 aa)
           
  0.630
bioB
bioB- biotin synthase (336 aa)
     
 
  0.616
purC
purC- phosphoribosylaminoimidazolesuccinocarboxamide synthase (286 aa)
         
  0.598
DR93_97
annotation not available (219 aa)
   
 
  0.591
DR93_419
annotation not available (1246 aa)
 
          0.543
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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